miRNA display CGI


Results 1 - 20 of 194 are showing below:
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GenBank Identifier RefSeq Acc. Name
9625433 NC_001335.1 Mycobacterium phage L5

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
1525 - 51661 87 19 -29.5 5' arm      3' arm
1524 - 51289 90 19.5 -27.4 5' arm      3' arm
1523 - 48875 90 20.5 -20.9 NP_039748 5' arm      3' arm
1522 - 48501 88 20.5 -19.4 NP_039746 5' arm      3' arm
1521 - 48310 87 20 -27.1 NP_039746 5' arm      3' arm
1520 - 46548 87 20 -22 NP_039741 5' arm      3' arm
1519 - 45808 90 19.5 -25.3 NP_039738 5' arm      3' arm
1518 - 44241 79 22 -23.9 NP_039734 5' arm      3' arm
1517 - 43571 90 22 -24.06 NP_039733 5' arm      3' arm
1516 - 43312 89 20.5 -22.9 NP_039733 5' arm      3' arm
1515 - 43089 90 22.5 -24.5 NP_039733 5' arm      3' arm
1514 - 41873 90 19.5 -20 NP_039730 5' arm      3' arm
1513 - 41713 90 19 -20.7 NP_039730 5' arm      3' arm
1512 - 41369 90 23.5 -22.2 NP_039729 5' arm      3' arm
1511 - 41103 89 20.5 -22 NP_039729 5' arm      3' arm
1510 - 40898 88 20 -26.2 NP_039729 5' arm      3' arm
1509 - 40392 88 20.5 -27.5 5' arm      3' arm
1508 - 39481 90 19.5 -24.1 NP_039724 5' arm      3' arm
1507 - 39348 90 22.5 -24 5' arm      3' arm
1506 - 38366 90 23 -34.3 NP_039722 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.