miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1421	+	49884	89	23	-21.7	NP_039752		5' arm      3' arm
1420	+	49775	81	20.5	-19.4	NP_039752		5' arm      3' arm
1422	+	50270	90	22.5	-24.2	NP_039752		5' arm      3' arm
1419	+	49057	88	23	-23.6	NP_039749		5' arm      3' arm
1523	-	48875	90	20.5	-20.9	NP_039748		5' arm      3' arm
1418	+	48844	88	21.5	-26.7	NP_039748		5' arm      3' arm
1522	-	48501	88	20.5	-19.4	NP_039746		5' arm      3' arm
1417	+	48224	87	23	-27.8	NP_039746		5' arm      3' arm
1521	-	48310	87	20	-27.1	NP_039746		5' arm      3' arm
1416	+	47629	89	19.5	-21.2	NP_039744		5' arm      3' arm
1415	+	47284	89	20.5	-26.4	NP_039743		5' arm      3' arm
1414	+	47070	89	21.5	-19.7	NP_039742		5' arm      3' arm
1520	-	46548	87	20	-22	NP_039741		5' arm      3' arm
1412	+	46311	90	22	-19.9	NP_039741		5' arm      3' arm
1413	+	46801	89	22.5	-23.2	NP_039741		5' arm      3' arm
1411	+	46076	87	20.5	-21.2	NP_039740		5' arm      3' arm
1519	-	45808	90	19.5	-25.3	NP_039738		5' arm      3' arm
1410	+	45720	88	21.5	-24.6	NP_039738		5' arm      3' arm
1408	+	44374	90	22.5	-20.7	NP_039735		5' arm      3' arm
1518	-	44241	79	22	-23.9	NP_039734		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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