miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1465	-	13858	90	20.5	-27.5	NP_039685		5' arm      3' arm
1464	-	13289	90	23	-22.1	NP_039684		5' arm      3' arm
1463	-	13160	89	22	-28.6			5' arm      3' arm
1462	-	12970	90	21.5	-20.9	NP_039683		5' arm      3' arm
1461	-	12685	89	21.5	-23.9	NP_039683		5' arm      3' arm
1460	-	12514	86	22	-26.4	NP_039682		5' arm      3' arm
1459	-	12412	90	19.5	-29.4			5' arm      3' arm
1458	-	12099	89	22	-21.9	NP_039681		5' arm      3' arm
1457	-	11921	89	21	-24.6	NP_039681		5' arm      3' arm
1456	-	11668	90	20	-20.1	NP_039681		5' arm      3' arm
1455	-	11339	90	21.5	-23.3	NP_039680		5' arm      3' arm
1454	-	10474	90	19	-19.7	NP_039679		5' arm      3' arm
1453	-	10141	88	21.5	-31	NP_039679		5' arm      3' arm
1452	-	9237	90	21	-22.8	NP_039678		5' arm      3' arm
1451	-	9105	89	19	-27.7	NP_039678		5' arm      3' arm
1450	-	8925	88	23.5	-21.5	NP_039678		5' arm      3' arm
1449	-	8593	89	19.5	-22.8	NP_039678		5' arm      3' arm
1448	-	7826	86	20	-21.1	NP_039677		5' arm      3' arm
1447	-	7597	87	22.5	-28	NP_039677		5' arm      3' arm
1446	-	7473	90	21.5	-24.7	NP_039677		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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