miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32585	+	140527	87	20.5	-21.7			5' arm      3' arm
32584	+	136732	88	23.5	-21.9			5' arm      3' arm
32586	+	140646	90	20.5	-20.4			5' arm      3' arm
32593	-	140582	90	24	-32.1			5' arm      3' arm
32588	-	47812	90	20.5	-20.4			5' arm      3' arm
32577	+	114801	88	20	-24			5' arm      3' arm
32565	+	256	88	21	-22.3	YP_249605		5' arm      3' arm
32587	-	4712	89	20.5	-20.1	YP_249608		5' arm      3' arm
32566	+	4625	87	20.5	-21.6	YP_249608		5' arm      3' arm
32567	+	26525	90	28	-24.3	YP_249629		5' arm      3' arm
32568	+	27370	89	29	-27.1	YP_249632		5' arm      3' arm
32569	+	31691	87	21.5	-27.3	YP_249637		5' arm      3' arm
32570	+	38317	90	20	-20.8	YP_249643		5' arm      3' arm
32571	+	61026	90	25.5	-23.4	YP_249668		5' arm      3' arm
32572	+	65674	87	22.5	-28.5	YP_249672		5' arm      3' arm
32589	-	67506	89	22	-23.1	YP_249673		5' arm      3' arm
32574	+	78439	87	19.5	-20.6	YP_249685		5' arm      3' arm
32573	+	78210	87	21	-21.8	YP_249685		5' arm      3' arm
32579	+	118916	88	21	-26	YP_249697		5' arm      3' arm
32575	+	105870	88	22.5	-21.4	YP_249711		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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