miRNA display CGI


Results 21 - 30 of 30 are showing below:
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GenBank Identifier RefSeq Acc. Name
68304136 NC_007151.1 Chrysodeixis chalcites nucleopolyhedrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
32576 + 106042 86 23.5 -19.91 YP_249711 5' arm      3' arm
32584 + 136732 88 23.5 -21.9 5' arm      3' arm
32593 - 140582 90 24 -32.1 5' arm      3' arm
32591 - 124947 88 24.5 -20.2 YP_249731 5' arm      3' arm
32580 + 124859 88 24.5 -20 YP_249731 5' arm      3' arm
32581 + 126248 88 24.5 -20.6 YP_249734 5' arm      3' arm
32571 + 61026 90 25.5 -23.4 YP_249668 5' arm      3' arm
32567 + 26525 90 28 -24.3 YP_249629 5' arm      3' arm
32590 - 109700 89 29 -27.3 YP_249714 5' arm      3' arm
32568 + 27370 89 29 -27.1 YP_249632 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.