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| GenBank Identifier | RefSeq Acc. | Name |
| 68304136 | NC_007151.1 | Chrysodeixis chalcites nucleopolyhedrovirus |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 32570 | + | 38317 | 90 | 20 | -20.8 | YP_249643 | 5' arm 3' arm | ||
| 32574 | + | 78439 | 87 | 19.5 | -20.6 | YP_249685 | 5' arm 3' arm | ||
| 32581 | + | 126248 | 88 | 24.5 | -20.6 | YP_249734 | 5' arm 3' arm | ||
| 32586 | + | 140646 | 90 | 20.5 | -20.4 | 5' arm 3' arm | |||
| 32588 | - | 47812 | 90 | 20.5 | -20.4 | 5' arm 3' arm | |||
| 32591 | - | 124947 | 88 | 24.5 | -20.2 | YP_249731 | 5' arm 3' arm | ||
| 32587 | - | 4712 | 89 | 20.5 | -20.1 | YP_249608 | 5' arm 3' arm | ||
| 32580 | + | 124859 | 88 | 24.5 | -20 | YP_249731 | 5' arm 3' arm | ||
| 32576 | + | 106042 | 86 | 23.5 | -19.91 | YP_249711 | 5' arm 3' arm | ||
| 32583 | + | 133689 | 89 | 21 | -19.7 | YP_249742 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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