miRNA display CGI


Results 21 - 40 of 54 are showing below:
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GenBank Identifier RefSeq Acc. Name
9633069 NC_000898.1 Human herpesvirus 6B

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
843 + 99137 88 20.5 -23.3 NP_050241 5' arm      3' arm
842 + 89319 80 20.5 -25.1 NP_050236 5' arm      3' arm
887 - 162110 81 20.5 -28.8 5' arm      3' arm
869 - 10299 90 21 -20.4 NP_050184 5' arm      3' arm
838 + 6427 90 21 -24.2 NP_050277 5' arm      3' arm
852 + 159748 90 21 -24.2 NP_050180 5' arm      3' arm
848 + 154732 90 21 -19.6 NP_050176 5' arm      3' arm
834 + 1411 90 21 -19.6 NP_050273 5' arm      3' arm
881 - 157445 90 21.5 -27.5 5' arm      3' arm
870 - 10538 90 21.5 -22.2 NP_050184 5' arm      
860 - 4124 90 21.5 -27.5 5' arm      3' arm
871 - 13599 89 21.5 -27.4 NP_050186 5' arm      3' arm
880 - 156758 88 21.5 -21.1 NP_050275 5' arm      3' arm
859 - 3437 88 21.5 -21.1 NP_050275 5' arm      3' arm
876 - 154837 89 21.5 -22 NP_050273 5' arm      3' arm
847 + 152649 84 21.5 -20.8 5' arm      3' arm
855 - 1516 89 21.5 -22 NP_050176 5' arm      3' arm
841 + 8820 87 22 -27.8 5' arm      3' arm
865 - 8131 90 22.5 -24.5 5' arm      3' arm
886 - 161452 90 22.5 -24.5 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.