miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32848	+	244	90	21	-20.6	YP_308889		5' arm      3' arm
32849	+	406	86	19.5	-20.8	YP_308889		5' arm      3' arm
32850	+	3807	89	27	-19.5	YP_308892		5' arm      3' arm
32851	+	22374	89	21	-24	YP_308911		5' arm      3' arm
32852	+	33920	78	19	-22.7	YP_308925		5' arm      3' arm
32853	+	43417	89	29.5	-26.2	YP_309026		5' arm      3' arm
32854	+	64279	90	22.5	-20.22	YP_308961		5' arm      3' arm
32855	+	69299	85	21.5	-31.7	YP_308966		5' arm      3' arm
32856	+	81900	89	20.5	-23.4	YP_308978		5' arm      3' arm
32857	+	94023	90	21.5	-21.1	YP_308991		5' arm      3' arm
32858	+	94295	88	22	-25.4	YP_308991		5' arm      3' arm
32859	+	94804	90	27	-23.6	YP_308992		5' arm      3' arm
32860	+	103822	90	23.5	-28.3	YP_309002		5' arm      3' arm
32861	+	125175	89	26.5	-24.1	YP_309026		5' arm      3' arm
32862	+	125400	89	23.5	-22.2			5' arm      3' arm
32863	-	26597	85	22	-26.5	YP_308918		5' arm      3' arm
32864	-	38993	89	23	-20.7	YP_308934		5' arm      3' arm
32865	-	43280	89	23.5	-22.2			5' arm      3' arm
32866	-	43505	89	26.5	-24.1	YP_309026		5' arm      3' arm
32867	-	67357	87	24.5	-19.6	YP_308965		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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