miRNA display CGI


Results 21 - 40 of 49 are showing below:
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GenBank Identifier RefSeq Acc. Name
9629553 NC_001826.1 Murid herpesvirus 4

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
6116 + 32453 89 20 -24.5 NP_044858 5' arm      3' arm
6132 - 31257 89 20 -20.6 NP_044857 5' arm      3' arm
6131 - 30929 87 19.5 -20.1 NP_044857 5' arm      3' arm
6115 + 31959 83 19.5 -25.5 NP_044857 5' arm      3' arm
6114 + 29902 89 21 -21.8 NP_044856 5' arm      3' arm
6113 + 29030 90 20 -22.4 NP_044855 5' arm      3' arm
6112 + 28931 88 20 -22.2 NP_044855 5' arm      3' arm
6130 - 26462 89 23 -21.64 NP_044853 5' arm      3' arm
6128 - 25362 75 20 -29.9 NP_044852 5' arm      3' arm
6127 - 23739 88 20.5 -21.3 NP_044851 5' arm      3' arm
6126 - 21764 75 20.5 -22.8 NP_044849 5' arm      3' arm
6125 - 19359 90 20.5 -26.8 NP_044849 5' arm      3' arm
6109 + 13171 83 20 -25 NP_044846 5' arm      3' arm
6110 + 13767 89 19 -25.9 NP_044846 5' arm      3' arm
6124 - 10925 87 20 -20.8 NP_044845 5' arm      3' arm
6108 + 8524 90 22.5 -26.5 NP_044844 5' arm      3' arm
6107 + 6325 85 22.5 -21.4 NP_044843 5' arm      3' arm
6103 + 2374 86 20 -24.5 NP_044841 5' arm      3' arm
6123 - 2091 90 21 -25.1 NP_044841 5' arm      3' arm
6146 - 102255 88 19 -27.4 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.