miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
9429	+	36024	90	19	-24.8	NP_065517		5' arm      3' arm
9481	-	29945	89	27	-24.7			5' arm      3' arm
9507	-	102464	87	23.5	-24.6	NP_065563		5' arm      3' arm
9436	+	56817	87	21	-24.5	NP_065527		5' arm      3' arm
9430	+	37960	77	20.5	-24.5	NP_065519		5' arm      3' arm
9438	+	60069	85	21.5	-24.46	NP_065535		5' arm      3' arm
9514	-	122992	89	21.5	-24.4	NP_065571		5' arm      3' arm
9414	+	1073	90	27.5	-24.4	NP_065504		5' arm      3' arm
9493	-	61180	89	20.5	-24.4	NP_065536		5' arm      3' arm
9418	+	20110	87	20	-24.3	NP_065512		5' arm      3' arm
9422	+	30018	89	20.5	-24.1			5' arm      3' arm
9468	-	13234	85	24	-24	NP_065509		5' arm      3' arm
9459	+	123092	90	19	-23.9	NP_065571		5' arm      3' arm
9495	-	64420	89	20	-23.8	NP_065539		5' arm      3' arm
9458	+	122904	89	21	-23.8	NP_065571		5' arm      3' arm
9413	+	431	87	27	-23.7			5' arm      3' arm
9431	+	39060	87	20.5	-23.6	NP_065520		5' arm      3' arm
9415	+	6996	89	20	-23.5	NP_065508		5' arm      3' arm
9489	-	57225	90	19.5	-23.3	NP_065532		5' arm      3' arm
9461	+	124469	89	22	-23.3	NP_065571		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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