miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31442	+	5156	89	34.5	-33.1			5' arm      3' arm
31443	+	5247	90	32.5	-22.2			5' arm      3' arm
31444	+	5339	90	35.5	-28.5			5' arm      3' arm
31445	+	16367	89	23.5	-29			5' arm      3' arm
31446	-	538	90	31.5	-28.7			5' arm      3' arm
31447	-	674	89	22	-29.9			5' arm      3' arm
31448	-	3682	90	21	-27.4			5' arm      3' arm
31449	-	4090	90	19	-28.8			5' arm      3' arm
31450	+	965	90	30.5	-31.5			5' arm      3' arm
31451	+	1266	90	24.5	-23.84			5' arm      3' arm
31452	+	12959	90	19	-22.4			5' arm      3' arm
31453	-	1054	90	31	-32.8			5' arm      3' arm
31454	-	1350	90	32.5	-25.2			5' arm      3' arm
31455	+	738	86	25.5	-30.5			5' arm      3' arm
31456	+	846	86	24	-29.6			5' arm      3' arm
31457	+	5368	79	26.5	-32.5			5' arm      3' arm
31458	+	31612	87	35	-30.3			5' arm      3' arm
31459	-	823	86	22.5	-24.9			5' arm      3' arm
31460	-	932	85	21.5	-28.1			5' arm      3' arm
31461	-	5599	87	26	-24.1			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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