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| GenBank Identifier | RefSeq Acc. | Name |
| 38349471 | NC_002618.2 | Cocksfoot mottle virus |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 9838 | + | 2876 | 88 | 19 | -19.8 | NP_941957 | 5' arm 3' arm | ||
| 9839 | + | 3156 | 90 | 21 | -25.7 | NP_941377 | 5' arm 3' arm | ||
| 9840 | + | 3527 | 76 | 21.5 | -30.7 | NP_941377 | 5' arm 3' arm | ||
| 9841 | - | 607 | 90 | 19.5 | -22.9 | NP_941957 | 5' arm 3' arm | ||
| 9842 | - | 1013 | 87 | 19 | -21.4 | NP_941957 | 5' arm 3' arm | ||
| 9843 | - | 1968 | 88 | 21.5 | -23.7 | NP_941376 | 5' arm 3' arm | ||
| 9844 | - | 2067 | 90 | 23 | -21.7 | NP_941957 | 5' arm 3' arm | ||
| 9845 | - | 2962 | 86 | 19 | -20.8 | NP_941957 | 5' arm 3' arm | ||
| 9846 | - | 3207 | 89 | 21 | -26.6 | NP_941957 | 5' arm 3' arm | ||
| 9847 | - | 4067 | 85 | 20 | -19.6 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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