miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11688	-	23238	88	22.5	-24.3	NP_258291		5' arm      3' arm
11655	+	25923	90	25	-24.2			5' arm      3' arm
11694	-	70724	90	19.5	-24.2	NP_258342		5' arm      3' arm
11670	+	72196	90	21	-23.9	NP_258344		5' arm      3' arm
11679	+	110496	88	21	-23.9	NP_258381		5' arm      3' arm
11662	+	41996	87	20.5	-23.6	NP_258310		5' arm      3' arm
11661	+	34877	89	24	-23.5	NP_258304		5' arm      3' arm
11693	-	46118	88	20.5	-23.5	NP_258314		5' arm      3' arm
11698	-	88008	86	19	-23.4	NP_258358		5' arm      3' arm
11699	-	89603	87	26	-23.2			5' arm      3' arm
11674	+	98395	89	22	-23.1	NP_258368		5' arm      3' arm
11678	+	106035	89	22	-22.9	NP_258375		5' arm      3' arm
11666	+	61884	90	22	-22.8	NP_258336		5' arm      3' arm
11669	+	63534	90	21.5	-22.6	NP_258336		5' arm      3' arm
11681	+	131962	90	20.5	-22.5	NP_258403		5' arm      3' arm
11656	+	26329	86	19	-22.3			5' arm      3' arm
11702	-	110565	89	21	-22.1	NP_258381		5' arm      3' arm
11675	+	99432	85	20.5	-22	NP_258369		5' arm      3' arm
11685	-	15060	89	23	-22	NP_258284		5' arm      3' arm
11663	+	42117	88	20.5	-21.7	NP_258310		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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