miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11652	+	17296	86	20.5	-25.51	NP_258285		5' arm      3' arm
11653	+	19933	84	19	-21.6	NP_258289		5' arm      3' arm
11654	+	25814	87	25	-33.5			5' arm      3' arm
11655	+	25923	90	25	-24.2			5' arm      3' arm
11657	+	26559	89	20.5	-28.8	NP_258293		5' arm      3' arm
11656	+	26329	86	19	-22.3			5' arm      3' arm
11658	+	31682	83	19.5	-21.5	NP_258300		5' arm      3' arm
11665	+	50652	89	19	-25.2	NP_258323		5' arm      3' arm
11664	+	46070	90	19.5	-27.2	NP_258314		5' arm      3' arm
11663	+	42117	88	20.5	-21.7	NP_258310		5' arm      3' arm
11662	+	41996	87	20.5	-23.6	NP_258310		5' arm      3' arm
11660	+	33110	88	23.5	-28	NP_258301		5' arm      3' arm
11661	+	34877	89	24	-23.5	NP_258304		5' arm      3' arm
11659	+	32426	89	26.5	-26.7	NP_258301		5' arm      3' arm
11700	-	102007	88	23.5	-21	NP_258372		5' arm      3' arm
11701	-	103654	90	28.5	-24.9			5' arm      3' arm
11702	-	110565	89	21	-22.1	NP_258381		5' arm      3' arm
11703	-	120933	85	19	-21.2	NP_258392		5' arm      3' arm
11704	-	127380	87	21	-25.7	NP_258397		5' arm      3' arm
11684	-	3522	89	25	-25.8			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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