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GenBank Identifier | RefSeq Acc. | Name |
22960704 | NC_004183.1 | Colorado tick fever virus segment 3 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
16833 | + | 1982 | 88 | 22 | -20.7 | NP_690893 | 5' arm 3' arm | ||
16834 | - | 1360 | 87 | 22 | -22.8 | NP_690897 | 5' arm 3' arm | ||
16835 | + | 543 | 87 | 19.5 | -26.1 | NP_690898 | 5' arm 3' arm | ||
16836 | - | 744 | 88 | 21.5 | -22 | NP_690898 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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