miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
118	-	3355	87	19	-29.2			5' arm      3' arm
94	+	6970	90	19	-22.7	AP_000143		5' arm      3' arm
139	-	19569	86	19	-24.6			5' arm      3' arm
141	-	20475	90	19	-27.8			5' arm      3' arm
110	+	22944	88	19	-31			5' arm      3' arm
97	+	10258	90	19	-22.6			5' arm      3' arm
89	+	4513	86	19	-21.9			5' arm      3' arm
133	-	15762	90	19	-25			5' arm      3' arm
142	-	20779	90	19	-22.7			5' arm      3' arm
135	-	16708	81	19	-25.9			5' arm      3' arm
101	+	13545	88	19.5	-24.6	AP_000147		5' arm      3' arm
102	+	14209	89	19.5	-23.4	AP_000147		5' arm      3' arm
143	-	20956	90	19.5	-30.3			5' arm      3' arm
106	+	20716	89	19.5	-25.1			5' arm      3' arm
152	-	33323	85	19.5	-20.1	AP_000159		5' arm      3' arm
113	+	25039	84	19.5	-29.8			5' arm      3' arm
119	-	4875	90	19.5	-23.2			5' arm      3' arm
103	+	16010	90	19.5	-22.3			5' arm      3' arm
109	+	22591	89	20	-34.1			5' arm      3' arm
117	-	3118	89	20	-22.7			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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