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| GenBank Identifier | RefSeq Acc. | Name |
| 38638196 | NC_005264.1 | Psittacid herpesvirus 1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24470 | + | 103546 | 85 | 19 | -23.7 | NP_944431 | 5' arm 3' arm | ||
| 24724 | - | 136290 | 81 | 19 | -20.2 | NP_944444 | 5' arm 3' arm | ||
| 24462 | + | 95245 | 87 | 19 | -28.9 | NP_944424 | 5' arm 3' arm | ||
| 24334 | + | 2657 | 86 | 19 | -21.6 | NP_944380 | 5' arm 3' arm | ||
| 24698 | - | 123558 | 85 | 19 | -25.7 | NP_944452 | 5' arm 3' arm | ||
| 24538 | + | 158614 | 85 | 19 | -25.7 | NP_944452 | 5' arm 3' arm | ||
| 24523 | + | 151156 | 88 | 19 | -22 | 5' arm 3' arm | |||
| 24379 | + | 37373 | 86 | 19 | -26.2 | NP_944399 | 5' arm 3' arm | ||
| 24428 | + | 66445 | 83 | 19 | -22.1 | NP_944410 | 5' arm 3' arm | ||
| 24676 | - | 108934 | 88 | 19 | -19.6 | NP_944434 | 5' arm 3' arm | ||
| 24473 | + | 106819 | 90 | 19 | -22.7 | NP_944432 | 5' arm 3' arm | ||
| 24663 | - | 101340 | 88 | 19 | -21 | NP_944430 | 5' arm 3' arm | ||
| 24754 | - | 156525 | 90 | 19 | -23.3 | NP_944452 | 5' arm 3' arm | ||
| 24673 | - | 106278 | 83 | 19 | -23.6 | NP_944432 | 5' arm 3' arm | ||
| 24519 | + | 148864 | 89 | 19 | -25.4 | NP_944451 | 5' arm 3' arm | ||
| 24469 | + | 103412 | 89 | 19 | -21.6 | NP_944431 | 5' arm 3' arm | ||
| 24456 | + | 90457 | 81 | 19 | -25.9 | NP_944421 | 5' arm 3' arm | ||
| 24345 | + | 13672 | 88 | 19 | -23.9 | NP_944386 | 5' arm 3' arm | ||
| 24454 | + | 89878 | 88 | 19 | -24.5 | NP_944421 | 5' arm 3' arm | ||
| 24493 | + | 121760 | 88 | 19 | -27.8 | NP_944441 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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