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| GenBank Identifier | RefSeq Acc. | Name |
| 38638196 | NC_005264.1 | Psittacid herpesvirus 1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24349 | + | 17321 | 90 | 24 | -31.6 | NP_944388 | 5' arm 3' arm | ||
| 24475 | + | 108540 | 90 | 24 | -25.8 | NP_944434 | 5' arm 3' arm | ||
| 24421 | + | 62275 | 86 | 23.5 | -30 | NP_944409 | 5' arm 3' arm | ||
| 24725 | - | 137053 | 86 | 23.5 | -27.3 | NP_944445 | 5' arm 3' arm | ||
| 24560 | - | 16307 | 90 | 23.5 | -25.5 | NP_944387 | 5' arm 3' arm | ||
| 24412 | + | 57427 | 90 | 23.5 | -24.6 | NP_944409 | 5' arm 3' arm | ||
| 24672 | - | 106155 | 90 | 23.5 | -29.9 | NP_944432 | 5' arm 3' arm | ||
| 24642 | - | 88087 | 89 | 23.5 | -25.7 | NP_944420 | 5' arm 3' arm | ||
| 24496 | + | 122439 | 90 | 23.5 | -24.7 | NP_944452 | 5' arm 3' arm | ||
| 24756 | - | 159733 | 90 | 23.5 | -24.7 | NP_944452 | 5' arm 3' arm | ||
| 24418 | + | 60843 | 85 | 23.5 | -20 | NP_944409 | 5' arm 3' arm | ||
| 24669 | - | 105467 | 86 | 23 | -20.3 | 5' arm 3' arm | |||
| 24443 | + | 82379 | 85 | 23 | -24.5 | NP_944418 | 5' arm 3' arm | ||
| 24723 | - | 136048 | 90 | 23 | -21 | NP_944444 | 5' arm 3' arm | ||
| 24659 | - | 97747 | 86 | 23 | -20 | NP_944427 | 5' arm 3' arm | ||
| 24749 | - | 151687 | 87 | 23 | -34.4 | 5' arm 3' arm | |||
| 24357 | + | 23010 | 90 | 23 | -22.6 | NP_944390 | 5' arm 3' arm | ||
| 24355 | + | 21515 | 90 | 23 | -19.9 | NP_944389 | 5' arm 3' arm | ||
| 24397 | + | 47685 | 90 | 23 | -24.4 | 5' arm 3' arm | |||
| 24656 | - | 93942 | 88 | 23 | -25.3 | NP_944423 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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