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| GenBank Identifier | RefSeq Acc. | Name |
| 38638196 | NC_005264.1 | Psittacid herpesvirus 1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24357 | + | 23010 | 90 | 23 | -22.6 | NP_944390 | 5' arm 3' arm | ||
| 24590 | - | 41294 | 90 | 23 | -23.6 | NP_944401 | 5' arm 3' arm | ||
| 24656 | - | 93942 | 88 | 23 | -25.3 | NP_944423 | 5' arm 3' arm | ||
| 24443 | + | 82379 | 85 | 23 | -24.5 | NP_944418 | 5' arm 3' arm | ||
| 24397 | + | 47685 | 90 | 23 | -24.4 | 5' arm 3' arm | |||
| 24614 | - | 65165 | 89 | 23 | -23.7 | NP_944409 | 5' arm 3' arm | ||
| 24352 | + | 19192 | 90 | 22.5 | -21.2 | 5' arm 3' arm | |||
| 24625 | - | 76750 | 90 | 22.5 | -24.8 | NP_944415 | 5' arm 3' arm | ||
| 24430 | + | 67730 | 90 | 22.5 | -23.5 | NP_944410 | 5' arm 3' arm | ||
| 24337 | + | 3757 | 90 | 22.5 | -22.6 | NP_944380 | 5' arm 3' arm | ||
| 24646 | - | 88868 | 86 | 22.5 | -21.6 | NP_944420 | 5' arm 3' arm | ||
| 24640 | - | 87436 | 88 | 22.5 | -21.2 | NP_944420 | 5' arm 3' arm | ||
| 24485 | + | 116228 | 90 | 22.5 | -21.6 | NP_944438 | 5' arm 3' arm | ||
| 24632 | - | 82733 | 88 | 22.5 | -29.9 | NP_944418 | 5' arm 3' arm | ||
| 24654 | - | 93729 | 90 | 22.5 | -31.5 | NP_944423 | 5' arm 3' arm | ||
| 24435 | + | 71741 | 90 | 22.5 | -23.3 | NP_944412 | 5' arm 3' arm | ||
| 24433 | + | 69415 | 90 | 22.5 | -27.32 | 5' arm 3' arm | |||
| 24446 | + | 84213 | 88 | 22.5 | -21.7 | NP_944419 | 5' arm 3' arm | ||
| 24534 | + | 156360 | 90 | 22.5 | -21.3 | NP_944441 | 5' arm 3' arm | ||
| 24627 | - | 78045 | 85 | 22.5 | -25.4 | NP_944415 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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