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GenBank Identifier | RefSeq Acc. | Name |
29366687 | NC_004667.1 | Grapevine leafroll-associated virus 3 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
18036 | + | 718 | 87 | 23 | -19.5 | NP_813795 | 5' arm 3' arm | ||
18037 | + | 4169 | 85 | 20 | -23 | 5' arm 3' arm | |||
18038 | + | 9018 | 87 | 19.5 | -22.6 | 5' arm 3' arm | |||
18039 | + | 9326 | 89 | 23.5 | -19.7 | 5' arm 3' arm | |||
18040 | - | 13507 | 90 | 19.5 | -20 | NP_813801 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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