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| GenBank Identifier | RefSeq Acc. | Name |
| 9629914 | NC_001870.1 | Simian-Human immunodeficiency virus |
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| ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF |
Known viral miRNA
|
Match to own genomic region# | Target prediction with RNAhybrid |
| 6706 | + | 1828 | 81 | 25 | -28.7 | NP_046122 | 5' arm 3' arm | ||
| 6704 | + | 37 | 90 | 22.5 | -22.6 | 5' arm 3' arm | |||
| 6705 | + | 241 | 72 | 19.5 | -34.9 | 5' arm 3' arm | |||
| 6707 | + | 8928 | 88 | 21.5 | -20.1 | NP_046131 | 5' arm 3' arm | ||
| 6708 | + | 9860 | 90 | 22.5 | -22.6 | 5' arm 3' arm | |||
| 6709 | - | 1931 | 88 | 19 | -20.4 | NP_046123 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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