miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12280	+	4559	68	19	-23.6	NP_536633		5' arm      3' arm
12281	+	8057	89	19	-25.24			5' arm      3' arm
12282	+	9900	87	19.5	-24	NP_536641		5' arm      3' arm
12283	+	15338	89	19.5	-25.8	NP_536648		5' arm      3' arm
12284	+	16695	90	21	-25.7	NP_536650		5' arm      3' arm
12285	+	17569	87	19.5	-26.3	NP_536651		5' arm      3' arm
12286	+	25887	84	21	-20.4	NP_536665		5' arm      3' arm
12287	-	4460	88	22.5	-27	NP_536633		5' arm      3' arm
12288	-	6585	90	23.5	-26	NP_536638		5' arm      3' arm
12289	-	8145	89	20	-27.24			5' arm      3' arm
12290	-	8661	85	20.5	-21.3	NP_536641		5' arm      3' arm
12291	-	8775	90	21.5	-19.8	NP_536641		5' arm      3' arm
12292	-	10319	89	20.5	-22	NP_536641		5' arm      3' arm
12293	-	11514	89	21.5	-22.5	NP_536643		5' arm      3' arm
12294	-	11645	89	21.5	-24.3			5' arm      3' arm
12295	-	12582	86	22	-20.8	NP_536646		5' arm      3' arm
12296	-	14167	90	21	-20.4	NP_536648		5' arm      3' arm
12297	-	17657	90	22.5	-30.4	NP_536651		5' arm      3' arm
12298	-	20209	90	19.5	-22.4	NP_536656		5' arm      3' arm
12299	-	20998	90	19	-25.2	NP_536656		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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