miRNA display CGI


Results 1 - 20 of 24 are showing below:
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GenBank Identifier RefSeq Acc. Name
9630960 NC_001963.1 Sphaeropsis sapinea RNA virus 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
7587 + 352 88 19 -25.5 NP_047557 5' arm      3' arm
7588 + 662 89 22.5 -24.7 NP_047557 5' arm      3' arm
7589 + 943 89 21 -21.7 NP_047557 5' arm      3' arm
7590 + 1038 88 21 -22.9 NP_047557 5' arm      3' arm
7591 + 1364 89 19.5 -21.2 NP_047557 5' arm      3' arm
7592 + 1517 89 19 -32.2 NP_047557 5' arm      3' arm
7593 + 1861 90 22.5 -19.5 NP_047557 5' arm      3' arm
7594 + 1965 88 19 -20.1 NP_047557 5' arm      3' arm
7595 + 2169 88 20 -20.2 NP_047557 5' arm      3' arm
7596 + 2733 90 24 -23 NP_047558 5' arm      3' arm
7597 + 3136 88 20.5 -22 NP_047558 5' arm      3' arm
7598 + 3782 86 23 -23.4 NP_047558 5' arm      3' arm
7599 + 4245 89 24 -22.1 NP_047558 5' arm      3' arm
7600 + 4680 89 23 -23.2 NP_047558 5' arm      3' arm
7601 - 911 89 19.5 -20.8 NP_047557 5' arm      3' arm
7602 - 2019 79 19 -24.5 NP_047557 5' arm      3' arm
7603 - 2168 90 20 -27.1 NP_047557 5' arm      3' arm
7604 - 2256 88 21.5 -26.8 NP_047557 5' arm      3' arm
7605 - 2570 90 20 -31.6 NP_047557 5' arm      3' arm
7606 - 3169 89 20.5 -21.5 NP_047558 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.