miRNA display CGI


Results 21 - 40 of 119 are showing below:
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GenBank Identifier RefSeq Acc. Name
58042841 NC_005137.2 Choristoneura fumiferana defective nucleopolyhedrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22907 + 110700 90 22.5 -20.6 NP_932739 5' arm      3' arm
22956 - 93800 88 19 -20.7 NP_932720 5' arm      3' arm
22942 - 61329 84 21 -20.7 NP_932683 5' arm      3' arm
22879 + 57494 81 22.5 -20.9 NP_932675 5' arm      3' arm
22968 - 119776 87 22.5 -21 NP_932748 5' arm      3' arm
22948 - 77533 89 21 -21.1 NP_932699 5' arm      3' arm
22899 + 98227 89 21.5 -21.3 5' arm      3' arm
22873 + 35560 90 19 -21.3 NP_932654 5' arm      3' arm
22893 + 88013 89 20 -21.4 NP_932711 5' arm      3' arm
22958 - 106682 90 23 -21.4 NP_932735 5' arm      3' arm
22966 - 116448 89 24 -21.5 NP_932743 5' arm      3' arm
22903 + 103608 90 21 -21.5 NP_932732 5' arm      3' arm
22889 + 78759 89 21.5 -21.5 NP_932701 5' arm      3' arm
22855 + 2425 89 19 -21.5 NP_932614 5' arm      3' arm
22858 + 7427 90 21 -21.6 NP_932619 5' arm      3' arm
22923 - 24378 89 23 -21.6 NP_932640 5' arm      3' arm
22900 + 98426 87 20.5 -21.7 NP_932727 5' arm      3' arm
22964 - 110974 88 20 -21.8 NP_932739 5' arm      3' arm
22857 + 7306 89 20.5 -21.8 NP_932619 5' arm      3' arm
22944 - 63784 90 21.5 -22 NP_932687 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.