miRNA display CGI


Results 41 - 60 of 119 are showing below:
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GenBank Identifier RefSeq Acc. Name
58042841 NC_005137.2 Choristoneura fumiferana defective nucleopolyhedrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22882 + 63696 88 21.5 -25 NP_932687 5' arm      3' arm
22936 - 46206 89 23 -25 NP_932667 5' arm      3' arm
22970 - 120468 87 20 -24.9 NP_932749 5' arm      3' arm
22906 + 110500 88 19.5 -24.9 NP_932739 5' arm      3' arm
22859 + 9199 88 21.5 -24.79 NP_932621 5' arm      3' arm
22892 + 85541 90 22.5 -24.6 NP_932708 5' arm      3' arm
22918 - 10922 89 20.5 -24.5 NP_932623 5' arm      3' arm
22861 + 12938 89 19.5 -24.3 NP_932625 5' arm      3' arm
22972 - 130823 90 24 -24.2 NP_932609 5' arm      3' arm
22895 + 95419 90 22.5 -24.1 NP_932723 5' arm      3' arm
22890 + 80258 89 22 -24.1 NP_932703 5' arm      3' arm
22963 - 109583 89 19.5 -24.1 NP_932738 5' arm      3' arm
22887 + 68479 88 21 -24 NP_932691 5' arm      3' arm
22912 + 122824 89 24.5 -23.9 NP_932750 5' arm      3' arm
22965 - 112765 90 19.5 -23.6 NP_932741 5' arm      3' arm
22875 + 47747 88 20.5 -23.5 NP_932668 5' arm      3' arm
22862 + 17455 89 23.5 -23.5 NP_932630 5' arm      3' arm
22877 + 51744 89 19.5 -23.5 NP_932670 5' arm      3' arm
22939 - 52636 89 22.5 -23.5 NP_932671 5' arm      3' arm
22935 - 45794 88 21 -23.31 NP_932667 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.