miRNA display CGI


Results 41 - 60 of 119 are showing below:
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GenBank Identifier RefSeq Acc. Name
58042841 NC_005137.2 Choristoneura fumiferana defective nucleopolyhedrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22857 + 7306 89 20.5 -21.8 NP_932619 5' arm      3' arm
22858 + 7427 90 21 -21.6 NP_932619 5' arm      3' arm
22859 + 9199 88 21.5 -24.79 NP_932621 5' arm      3' arm
22855 + 2425 89 19 -21.5 NP_932614 5' arm      3' arm
22867 + 27480 90 20 -19.9 NP_932644 5' arm      3' arm
22871 + 33756 88 24 -19.7 NP_932652 5' arm      3' arm
22869 + 32234 88 22 -31 NP_932651 5' arm      3' arm
22883 + 63977 88 20.5 -22.1 NP_932687 5' arm      3' arm
22882 + 63696 88 21.5 -25 NP_932687 5' arm      3' arm
22881 + 62988 90 20 -19.5 NP_932686 5' arm      3' arm
22880 + 60896 90 25.5 -29.4 NP_932682 5' arm      3' arm
22878 + 56561 87 20.5 -20.12 NP_932674 5' arm      3' arm
22879 + 57494 81 22.5 -20.9 NP_932675 5' arm      3' arm
22877 + 51744 89 19.5 -23.5 NP_932670 5' arm      3' arm
22875 + 47747 88 20.5 -23.5 NP_932668 5' arm      3' arm
22874 + 47343 88 21 -20.5 NP_932668 5' arm      3' arm
22876 + 49722 85 22.5 -23.3 NP_932670 5' arm      3' arm
22873 + 35560 90 19 -21.3 NP_932654 5' arm      3' arm
22870 + 32914 83 20.5 -30.7 NP_932651 5' arm      3' arm
22872 + 33904 90 21.5 -19.5 NP_932653 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.