miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
15426	+	1709	90	21	-22.7	NP_647496		5' arm      3' arm
15427	+	2400	89	21	-24.7	NP_647496		5' arm      3' arm
15428	+	3180	90	22	-23.7	NP_647496		5' arm      3' arm
15429	+	3475	87	19.5	-20.1	NP_647496		5' arm      3' arm
15430	+	3917	86	20.5	-22.61	NP_647496		5' arm      3' arm
15431	+	5197	90	19	-21.25	NP_647496		5' arm      3' arm
15432	+	5381	89	19	-25.7	NP_647496		5' arm      3' arm
15433	+	7163	84	22.5	-21.3	NP_647496		5' arm      3' arm
15434	+	8242	86	23.5	-26.6	NP_647497		5' arm      3' arm
15435	+	10014	87	23	-20	NP_647497		5' arm      3' arm
15436	+	10292	88	24.5	-23.3	NP_647497		5' arm      3' arm
15437	+	10877	86	20.5	-24.3	NP_647497		5' arm      3' arm
15438	+	11711	79	19.5	-21.1	NP_647497		5' arm      3' arm
15439	-	243	88	19	-22.9	NP_647496		5' arm      3' arm
15440	-	338	89	20	-20.1	NP_647496		5' arm      3' arm
15441	-	4388	88	21.5	-19.9	NP_647496		5' arm      3' arm
15442	-	4593	90	23	-35.5	NP_647496		5' arm      3' arm
15443	-	4774	86	20.5	-24	NP_647496		5' arm      3' arm
15444	-	5338	90	21	-23.5	NP_647496		5' arm      3' arm
15445	-	6334	88	23	-22.3	NP_647496		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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