miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12967	-	38638	85	20.5	-27.2	NP_569793		5' arm      3' arm
12966	-	38449	88	22	-20.3	NP_569792		5' arm      3' arm
12965	-	38056	90	24	-23.7	NP_569792		5' arm      3' arm
12964	-	37781	89	21	-24.52	NP_569792		5' arm      3' arm
12963	-	37636	90	20.5	-20.9			5' arm      3' arm
12962	-	37495	90	21.5	-21.5			5' arm      3' arm
12961	-	37358	90	19.5	-24.1			5' arm      3' arm
12960	-	37026	89	23.5	-26.2			5' arm      3' arm
12959	-	36694	90	21	-26	NP_569791		5' arm      3' arm
12958	-	36145	87	20.5	-24.6	NP_569789		5' arm      3' arm
12957	-	35889	90	21	-31.8	NP_569788		5' arm      3' arm
12956	-	35466	87	19	-22.2	NP_569787		5' arm      3' arm
12955	-	35024	86	20	-22.3	NP_569787		5' arm      3' arm
12954	-	34740	90	21.5	-23.4	NP_569785		5' arm      3' arm
12953	-	34456	87	23.5	-21.4	NP_569785		5' arm      3' arm
12952	-	34024	89	20.5	-28.4	NP_569784		5' arm      3' arm
12951	-	33710	90	19.5	-20.6	NP_569783		5' arm      3' arm
12950	-	33572	90	21.5	-22.3	NP_569783		5' arm      3' arm
12949	-	32754	86	25	-25.8	NP_569781		5' arm      3' arm
12948	-	32409	87	20	-19.9	NP_569779		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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