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| GenBank Identifier | RefSeq Acc. | Name |
| 18496886 | NC_003387.1 | Mycobacteriophage TM4 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12852 | + | 41645 | 89 | 22 | -27.6 | 5' arm 3' arm | |||
| 12831 | + | 29092 | 88 | 23 | -27.5 | NP_569772 | 5' arm 3' arm | ||
| 12775 | + | 1260 | 90 | 21.5 | -27.5 | NP_569740 | 5' arm 3' arm | ||
| 12900 | - | 7969 | 88 | 24 | -27.5 | NP_569748 | 5' arm 3' arm | ||
| 12863 | + | 46145 | 85 | 23.5 | -27.4 | NP_569808 | 5' arm 3' arm | ||
| 12967 | - | 38638 | 85 | 20.5 | -27.2 | NP_569793 | 5' arm 3' arm | ||
| 12903 | - | 9302 | 90 | 22 | -27.1 | 5' arm 3' arm | |||
| 12860 | + | 43879 | 88 | 22 | -27 | NP_569803 | 5' arm 3' arm | ||
| 12940 | - | 28331 | 90 | 24.5 | -26.8 | NP_569771 | 5' arm 3' arm | ||
| 12989 | - | 47353 | 88 | 20 | -26.8 | NP_569811 | 5' arm 3' arm | ||
| 12996 | - | 50054 | 85 | 22 | -26.6 | 5' arm 3' arm | |||
| 12777 | + | 1846 | 88 | 19 | -26.6 | NP_569740 | 5' arm 3' arm | ||
| 12805 | + | 17661 | 78 | 20 | -26.5 | NP_569757 | 5' arm 3' arm | ||
| 12856 | + | 42970 | 88 | 20 | -26.5 | NP_569803 | 5' arm 3' arm | ||
| 13004 | - | 52307 | 88 | 24.5 | -26.5 | NP_569824 | 5' arm 3' arm | ||
| 12947 | - | 31882 | 89 | 21.5 | -26.5 | NP_569777 | 5' arm 3' arm | ||
| 12868 | + | 47988 | 90 | 20 | -26.4 | NP_569813 | 5' arm 3' arm | ||
| 12808 | + | 18955 | 90 | 20 | -26.4 | NP_569759 | 5' arm 3' arm | ||
| 12796 | + | 11596 | 81 | 20.5 | -26.4 | NP_569753 | 5' arm 3' arm | ||
| 12859 | + | 43624 | 86 | 19.5 | -26.3 | NP_569803 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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