miRNA display CGI

Results 21 - 26 of 26 are showing below:
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Acc. No.	Name	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
MIMAT0001581	hcmv-miR-US25-1	-50	NC_006273.1	+	221807	0.69	0.962831
	Target:  5'- cGGcCCGGGCCGCccGGCGGg- -3' miRNA:   3'- -CCaGGCUCGGUGacUCGCCaa -5'
MIMAT0001581	hcmv-miR-US25-1	-50	NC_006273.1	+	142386	0.69	0.959075
	Target:  5'- -uUCCGcAGCCGCUcAGCGGUa -3' miRNA:   3'- ccAGGC-UCGGUGAcUCGCCAa -5'
MIMAT0001581	hcmv-miR-US25-1	-50	NC_006273.1	-	95472	0.7	0.945803
	Target:  5'- gGGUCCGAggcGCCgaccccgGCUGGGCGGc- -3' miRNA:   3'- -CCAGGCU---CGG-------UGACUCGCCaa -5'
MIMAT0001581	hcmv-miR-US25-1	-50	NC_006273.1	+	87606	0.71	0.919591
	Target:  5'- cGUCCGucGCCGCUGuugcGGCGGUa -3' miRNA:   3'- cCAGGCu-CGGUGAC----UCGCCAa -5'
MIMAT0001581	hcmv-miR-US25-1	-50	NC_006273.1	-	145172	0.74	0.791512
	Target:  5'- cGGUUCGGGCgGCuUGAGCGGg- -3' miRNA:   3'- -CCAGGCUCGgUG-ACUCGCCaa -5'
MIMAT0001581	hcmv-miR-US25-1	-50	NC_006273.1	+	221296	1	0.03163
	Target:  5'- cGGUCCGAGCCACUGAGCGGUUc -3' miRNA:   3'- -CCAGGCUCGGUGACUCGCCAA- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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