Results 41 - 60 of 148 are showing below:
Show page:
<< Previous Page | Next Page >>
Acc. No. | Name | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | - | 26315 | 0.7 | 0.970259 |
Target: 5'- cUGGGGGGAC-CgGGGCAguggACAGg -3' miRNA: 3'- -AUUCCCCUGuGgUCCGUa---UGUU- -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | - | 20177 | 0.7 | 0.970259 |
Target: 5'- cUGGGGGGAC-CgGGGCAguggACAGg -3' miRNA: 3'- -AUUCCCCUGuGgUCCGUa---UGUU- -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | - | 29384 | 0.7 | 0.970259 |
Target: 5'- cUGGGGGGAC-CgGGGCAguggACAGg -3' miRNA: 3'- -AUUCCCCUGuGgUCCGUa---UGUU- -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | - | 116369 | 0.69 | 0.987345 |
Target: 5'- gGAGGGGGCGCUgAGGCcucACAu -3' miRNA: 3'- aUUCCCCUGUGG-UCCGua-UGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 169597 | 0.69 | 0.985534 |
Target: 5'- --cGGGGGCugCGGGCGguggaugGCGg -3' miRNA: 3'- auuCCCCUGugGUCCGUa------UGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | - | 36863 | 0.69 | 0.990439 |
Target: 5'- aGGGGGGACAUguGGCuggACc- -3' miRNA: 3'- aUUCCCCUGUGguCCGua-UGuu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | - | 27589 | 0.69 | 0.987345 |
Target: 5'- gGAGGGGAgCAgCAGGguUGCu- -3' miRNA: 3'- aUUCCCCU-GUgGUCCguAUGuu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 40393 | 0.69 | 0.990439 |
Target: 5'- gGAGGccgccgcaaGGACGCCGGGCcgGCu- -3' miRNA: 3'- aUUCC---------CCUGUGGUCCGuaUGuu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | - | 21451 | 0.69 | 0.987345 |
Target: 5'- gGAGGGGAgCAgCAGGguUGCu- -3' miRNA: 3'- aUUCCCCU-GUgGUCCguAUGuu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 143208 | 0.69 | 0.990439 |
Target: 5'- gGAGGccgccgcaaGGACGCCGGGCcgGCu- -3' miRNA: 3'- aUUCC---------CCUGUGGUCCGuaUGuu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | - | 82015 | 0.69 | 0.990439 |
Target: 5'- cUGAGGGGAUACUGGGUcaACu- -3' miRNA: 3'- -AUUCCCCUGUGGUCCGuaUGuu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | - | 134861 | 0.69 | 0.990439 |
Target: 5'- --cGGGGAgGCCAGGUAgccCAGc -3' miRNA: 3'- auuCCCCUgUGGUCCGUau-GUU- -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | - | 15313 | 0.69 | 0.987345 |
Target: 5'- gGAGGGGAgCAgCAGGguUGCu- -3' miRNA: 3'- aUUCCCCU-GUgGUCCguAUGuu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | - | 12244 | 0.69 | 0.987345 |
Target: 5'- gGAGGGGAgCAgCAGGguUGCu- -3' miRNA: 3'- aUUCCCCU-GUgGUCCguAUGuu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 170134 | 0.69 | 0.985534 |
Target: 5'- --cGGGGGCugCGGGCGguggaugGCGg -3' miRNA: 3'- auuCCCCUGugGUCCGUa------UGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | - | 129782 | 0.69 | 0.988976 |
Target: 5'- --uGGGGcCACUgucaaGGGCAUGCAAu -3' miRNA: 3'- auuCCCCuGUGG-----UCCGUAUGUU- -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 171194 | 0.69 | 0.985534 |
Target: 5'- --cGGGGGCugCGGGCGguggaugGCGg -3' miRNA: 3'- auuCCCCUGugGUCCGUa------UGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | - | 24520 | 0.69 | 0.987345 |
Target: 5'- gGAGGGGAgCAgCAGGguUGCu- -3' miRNA: 3'- aUUCCCCU-GUgGUCCguAUGuu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | - | 33727 | 0.69 | 0.987345 |
Target: 5'- gGAGGGGAgCAgCAGGguUGCu- -3' miRNA: 3'- aUUCCCCU-GUgGUCCguAUGuu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | - | 30658 | 0.69 | 0.987345 |
Target: 5'- gGAGGGGAgCAgCAGGguUGCu- -3' miRNA: 3'- aUUCCCCU-GUgGUCCguAUGuu -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home