miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
12426	3'	-58.8	NC_003324.1	+	41440	0.67	0.518858
	Target:  5'- cGGCuacuucauuaAGCCG-CCCCCAG-CGCCgAuuuCGa -3' miRNA:   3'- -CCG----------UUGGCaGGGGGUCaGCGGgUu--GC- -5'
12426	3'	-58.8	NC_003324.1	+	41583	0.69	0.412873
	Target:  5'- aGGUGGCCGUCCCUCgcucGGgaaaGCCCcucuGCGa -3' miRNA:   3'- -CCGUUGGCAGGGGG----UCag--CGGGu---UGC- -5'
12426	3'	-58.8	NC_003324.1	+	42755	0.69	0.395064
	Target:  5'- cGGUuGCCGg-UCCUGGUgGCCCGGCGa -3' miRNA:   3'- -CCGuUGGCagGGGGUCAgCGGGUUGC- -5'
12426	3'	-58.8	NC_003324.1	+	43244	0.66	0.570536
	Target:  5'- aGGgGGCCG-CCUgCagGGUCGCCUGGCa -3' miRNA:   3'- -CCgUUGGCaGGGgG--UCAGCGGGUUGc -5'
12426	3'	-58.8	NC_003324.1	+	47635	0.66	0.570536
	Target:  5'- cGGCGACCGggCCgCCA-UCGUCgAGCu -3' miRNA:   3'- -CCGUUGGCa-GGgGGUcAGCGGgUUGc -5'
12426	3'	-58.8	NC_003324.1	+	54488	0.68	0.440492
	Target:  5'- cGGCAGCgGUCCCggggaguugCCGuUCGCCUGAUa -3' miRNA:   3'- -CCGUUGgCAGGG---------GGUcAGCGGGUUGc -5'
12426	3'	-58.8	NC_003324.1	+	55121	0.7	0.328984
	Target:  5'- cGGCAgcccaGCCGUCCgCCuugccUGCCCGGCGc -3' miRNA:   3'- -CCGU-----UGGCAGGgGGuca--GCGGGUUGC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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