Results 41 - 45 of 45 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
14464 | 5' | -56.3 | NC_003521.1 | + | 48947 | 0.66 | 0.93121 |
Target: 5'- cGCCGCC--GCCCAGuUGGAcGGACa- -3' miRNA: 3'- aUGGUGGacCGGGUCuACCU-CUUGaa -5' |
|||||||
14464 | 5' | -56.3 | NC_003521.1 | + | 139237 | 0.66 | 0.935694 |
Target: 5'- cUACCACCUGuacggggcuccucGCgCGGAgcgGGGGGACg- -3' miRNA: 3'- -AUGGUGGAC-------------CGgGUCUa--CCUCUUGaa -5' |
|||||||
14464 | 5' | -56.3 | NC_003521.1 | + | 117195 | 0.66 | 0.936181 |
Target: 5'- cUGCCGCC--GCCCGaggcGGUGGAGAugUc -3' miRNA: 3'- -AUGGUGGacCGGGU----CUACCUCUugAa -5' |
|||||||
14464 | 5' | -56.3 | NC_003521.1 | + | 113324 | 0.66 | 0.936181 |
Target: 5'- gACCugCUGGgCCAaGAcgccGGGGGGCUUc -3' miRNA: 3'- aUGGugGACCgGGU-CUa---CCUCUUGAA- -5' |
|||||||
14464 | 5' | -56.3 | NC_003521.1 | + | 128201 | 0.66 | 0.936181 |
Target: 5'- -uCCACCUGGgCUGGGUGuAGAGCc- -3' miRNA: 3'- auGGUGGACCgGGUCUACcUCUUGaa -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home