Results 41 - 60 of 68 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 143965 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 143638 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 143310 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 142655 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 142327 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 141999 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 145931 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 146259 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 74021 | 0.67 | 0.999898 |
Target: 5'- gGCAauGAUGUuaUGGUGUCGGCA-GCGUg- -3' miRNA: 3'- -UGU--UUACA--ACCGCGGUUGUuUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 149536 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 148225 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 149208 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 148880 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 148553 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 147897 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 147570 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 147242 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 146914 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 146587 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
|||||||
17315 | 3' | -45.7 | NC_004367.1 | + | 141344 | 0.67 | 0.999898 |
Target: 5'- gGCGGGgcgGggGGCGCC--CGAGCGUg- -3' miRNA: 3'- -UGUUUa--CaaCCGCGGuuGUUUGCAac -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home