miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
22570	3'	-55.6	NC_005091.1	+	25200	0.69	0.550462
	Target:  5'- aCCGGGGUCgAugcagCCgGcGCGUCGAugGCg -3' miRNA:   3'- -GGCUCCAGgUuua--GGgC-CGCAGCU--CG- -5'
22570	3'	-55.6	NC_005091.1	+	48603	0.68	0.657259
	Target:  5'- gUCGGGGUCCca--UCCGGCGagGcGCg -3' miRNA:   3'- -GGCUCCAGGuuuaGGGCCGCagCuCG- -5'
22570	3'	-55.6	NC_005091.1	+	14626	0.67	0.682902
	Target:  5'- gUCGGcGUCCAGuugcaagcagccgucGcCCCGGCaUCGAGCg -3' miRNA:   3'- -GGCUcCAGGUU---------------UaGGGCCGcAGCUCG- -5'
22570	3'	-55.6	NC_005091.1	+	12998	0.67	0.710376
	Target:  5'- uUCGGGG-CCGuuugucAUUCUGGCGcUCGGGUa -3' miRNA:   3'- -GGCUCCaGGUu-----UAGGGCCGC-AGCUCG- -5'
22570	3'	-55.6	NC_005091.1	+	1506	0.67	0.710376
	Target:  5'- uUCGGGGuaUCCgAAAUCCuUGGCGcUCG-GCa -3' miRNA:   3'- -GGCUCC--AGG-UUUAGG-GCCGC-AGCuCG- -5'
22570	3'	-55.6	NC_005091.1	+	48120	0.66	0.751612
	Target:  5'- aUCGaAGGUCCGAAuguUUuuGGCGUCa--- -3' miRNA:   3'- -GGC-UCCAGGUUU---AGggCCGCAGcucg -5'
22570	3'	-55.6	NC_005091.1	+	17013	0.66	0.751612
	Target:  5'- aCaAGGUaaAAAUCUCGGCGUCuGGUg -3' miRNA:   3'- gGcUCCAggUUUAGGGCCGCAGcUCG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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