Results 41 - 46 of 46 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value
|
| Predicted miRNA align pattern | |||||||
| 24335 | 5' | -58.5 | NC_005264.1 | + | 123428 | 0.74 | 0.393346 |
|
Target: 5'- cUCcGGCGCUGAgcagcgcaGUGCCC-CCUucGCCGAc -3' miRNA: 3'- -AGaCCGCGACU--------UACGGGuGGG--UGGCU- -5' |
|||||||
| 24335 | 5' | -58.5 | NC_005264.1 | + | 4401 | 0.74 | 0.393346 |
|
Target: 5'- cUCcGGCGCUGAgcagcgcaGUGCCC-CCUucGCCGAc -3' miRNA: 3'- -AGaCCGCGACU--------UACGGGuGGG--UGGCU- -5' |
|||||||
| 24335 | 5' | -58.5 | NC_005264.1 | + | 96637 | 0.75 | 0.323397 |
|
Target: 5'- gCUGGcCGCgGAGgcGCaCCGCCCGCCGAu -3' miRNA: 3'- aGACC-GCGaCUUa-CG-GGUGGGUGGCU- -5' |
|||||||
| 24335 | 5' | -58.5 | NC_005264.1 | + | 30841 | 0.79 | 0.192606 |
|
Target: 5'- aUCUGGCGCcGGucgGCCCACcgCCACCGGc -3' miRNA: 3'- -AGACCGCGaCUua-CGGGUG--GGUGGCU- -5' |
|||||||
| 24335 | 5' | -58.5 | NC_005264.1 | + | 54442 | 0.86 | 0.067282 |
|
Target: 5'- gCUGGCGCgggGGAUGCCCACC-GCCGAg -3' miRNA: 3'- aGACCGCGa--CUUACGGGUGGgUGGCU- -5' |
|||||||
| 24335 | 5' | -58.5 | NC_005264.1 | + | 159567 | 1.09 | 0.001729 |
|
Target: 5'- cUCUGGCGCUGAAUGCCCACCCACCGAg -3' miRNA: 3'- -AGACCGCGACUUACGGGUGGGUGGCU- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home