miRNA display CGI

Results 21 - 28 of 28 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
28165	5'	-50.5	NC_005887.1	+	27216	0.67	0.812509
	Target:  5'- aGUugAUCgagAACACGGGCGcaucGCGGCGc -3' miRNA:   3'- -UAugUGGa--UUGUGCCUGCa---UGUCGUu -5'
28165	5'	-50.5	NC_005887.1	+	29277	1.04	0.003795
	Target:  5'- aAUACACCUAACACGGACGUACAGCAAc -3' miRNA:   3'- -UAUGUGGAUUGUGCCUGCAUGUCGUU- -5'
28165	5'	-50.5	NC_005887.1	+	29486	0.69	0.68755
	Target:  5'- -gGCACCUGcCACGGuCGUGCcuuccguguuggucAGCAGc -3' miRNA:   3'- uaUGUGGAUuGUGCCuGCAUG--------------UCGUU- -5'
28165	5'	-50.5	NC_005887.1	+	31266	0.67	0.770457
	Target:  5'- gAUGCGCC--ACGCGGAauCGUuugaGCAGCGg -3' miRNA:   3'- -UAUGUGGauUGUGCCU--GCA----UGUCGUu -5'
28165	5'	-50.5	NC_005887.1	+	33768	0.7	0.596586
	Target:  5'- -aGCAUCUGGCGCGG-CGUGCcgGGCu- -3' miRNA:   3'- uaUGUGGAUUGUGCCuGCAUG--UCGuu -5'
28165	5'	-50.5	NC_005887.1	+	35369	0.74	0.418544
	Target:  5'- -gGCACC--ACGCGGGCcUGCAGCAGc -3' miRNA:   3'- uaUGUGGauUGUGCCUGcAUGUCGUU- -5'
28165	5'	-50.5	NC_005887.1	+	39825	0.7	0.596586
	Target:  5'- -aGCGCCUuGCGCa-GCGUGCGGCAGu -3' miRNA:   3'- uaUGUGGAuUGUGccUGCAUGUCGUU- -5'
28165	5'	-50.5	NC_005887.1	+	40683	0.73	0.439148
	Target:  5'- cUGCACCUGGCGCGcGCGcACGGCu- -3' miRNA:   3'- uAUGUGGAUUGUGCcUGCaUGUCGuu -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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