Results 41 - 60 of 280 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 87103 | 0.89 | 0.57708 |
Target: 5'- -uUAUAUAGCUUAGGgGUUAAAGGGUu -3' miRNA: 3'- ccAUAUAUCGAAUCCaCAAUUUCCCA- -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 142026 | 0.92 | 0.460345 |
Target: 5'- uGUAUAUAGCUUAGGUGUUAAAaGGUa -3' miRNA: 3'- cCAUAUAUCGAAUCCACAAUUUcCCA- -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 42267 | 1.07 | 0.07794 |
Target: 5'- aGUAUAUAGCUUAGGUGUUAAAGGGUa -3' miRNA: 3'- cCAUAUAUCGAAUCCACAAUUUCCCA- -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 71498 | 0.9 | 0.566087 |
Target: 5'- -uUAUAUAGCcUAGGUGUUAAAGGGg -3' miRNA: 3'- ccAUAUAUCGaAUCCACAAUUUCCCa -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 20153 | 1.08 | 0.075707 |
Target: 5'- cGUAUAUAGCUUAGGUGUUAAAGGGUa -3' miRNA: 3'- cCAUAUAUCGAAUCCACAAUUUCCCA- -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 116860 | 0.83 | 0.873875 |
Target: 5'- --cAUAUAGCUUAGaUGUUAAAGGGUu -3' miRNA: 3'- ccaUAUAUCGAAUCcACAAUUUCCCA- -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 13226 | 1.02 | 0.154483 |
Target: 5'- -aUAUAUAGCUUAGGUGUUAAAGGGUa -3' miRNA: 3'- ccAUAUAUCGAAUCCACAAUUUCCCA- -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 50229 | 0.83 | 0.857561 |
Target: 5'- -aUAUAUAGCUUAGGUGUUAAAGa-- -3' miRNA: 3'- ccAUAUAUCGAAUCCACAAUUUCcca -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 170619 | 0.84 | 0.812709 |
Target: 5'- -aUAUAUAGCUUAGGUGUUAAAGaGUu -3' miRNA: 3'- ccAUAUAUCGAAUCCACAAUUUCcCA- -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 27813 | 0.85 | 0.793339 |
Target: 5'- uGUAUAUAGCUUAGGcaUUAAAGGGUu -3' miRNA: 3'- cCAUAUAUCGAAUCCacAAUUUCCCA- -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 143064 | 0.87 | 0.709904 |
Target: 5'- -aUAUAUAGCUUAGaUGUUAAAGGGUa -3' miRNA: 3'- ccAUAUAUCGAAUCcACAAUUUCCCA- -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 76684 | 0.87 | 0.698999 |
Target: 5'- -aUAUAUAGCUUAaGUGUUAAAGGGUa -3' miRNA: 3'- ccAUAUAUCGAAUcCACAAUUUCCCA- -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 3478 | 0.88 | 0.654826 |
Target: 5'- uGUAUAUAGCUUAGGUGUUAaaaucGAGuGGUa -3' miRNA: 3'- cCAUAUAUCGAAUCCACAAU-----UUC-CCA- -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 97477 | 0.9 | 0.533466 |
Target: 5'- uGUAUAUAaCUUAGGUGUUAAAGGGUu -3' miRNA: 3'- cCAUAUAUcGAAUCCACAAUUUCCCA- -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 23507 | 0.9 | 0.522738 |
Target: 5'- uGUAUAUAGCUUAaGUGUUAAAGGGUu -3' miRNA: 3'- cCAUAUAUCGAAUcCACAAUUUCCCA- -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 6230 | 0.91 | 0.512093 |
Target: 5'- aGUAUAUAGCUUAGuUGUUAAAGGGUu -3' miRNA: 3'- cCAUAUAUCGAAUCcACAAUUUCCCA- -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 167292 | 0.92 | 0.47048 |
Target: 5'- uGUAUAUAaCUUAGGUGUUAAAGGGUa -3' miRNA: 3'- cCAUAUAUcGAAUCCACAAUUUCCCA- -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 29494 | 0.93 | 0.411501 |
Target: 5'- -aUAUAUAGCUUAGGUGUUaAAAGGGUa -3' miRNA: 3'- ccAUAUAUCGAAUCCACAA-UUUCCCA- -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 39307 | 0.96 | 0.308354 |
Target: 5'- uGUAUAUAGCUUAGGUGUUAAAGGa- -3' miRNA: 3'- cCAUAUAUCGAAUCCACAAUUUCCca -5' |
|||||||
28254 | 5' | -43.2 | NC_005902.1 | + | 54378 | 1 | 0.182277 |
Target: 5'- -aUGUAUAGCUUAGGUGUUAAAGGGUu -3' miRNA: 3'- ccAUAUAUCGAAUCCACAAUUUCCCA- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home