Results 21 - 40 of 106 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11211 | 0.99 | 0.004602 |
Target: 5'- gCUAGCUUGGCCCAAGCCGGUcUGGACu -3' miRNA: 3'- -GAUCGAACCGGGUUCGGCCGaACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11218 | 0.7 | 0.460794 |
Target: 5'- -gAGUUUGccgaGUCCAGaCCGGCUUGGGCc -3' miRNA: 3'- gaUCGAAC----CGGGUUcGGCCGAACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11276 | 0.99 | 0.004602 |
Target: 5'- gCUAGCUUGGCCCAAGCCGGUcUGGACu -3' miRNA: 3'- -GAUCGAACCGGGUUCGGCCGaACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11283 | 0.7 | 0.460794 |
Target: 5'- -gAGUUUGccgaGUCCAGaCCGGCUUGGGCc -3' miRNA: 3'- gaUCGAAC----CGGGUUcGGCCGAACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11341 | 0.99 | 0.004602 |
Target: 5'- gCUAGCUUGGCCCAAGCCGGUcUGGACu -3' miRNA: 3'- -GAUCGAACCGGGUUCGGCCGaACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11348 | 0.7 | 0.460794 |
Target: 5'- -gAGUUUGccgaGUCCAGaCCGGCUUGGGCc -3' miRNA: 3'- gaUCGAAC----CGGGUUcGGCCGAACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11406 | 0.99 | 0.004602 |
Target: 5'- gCUAGCUUGGCCCAAGCCGGUcUGGACu -3' miRNA: 3'- -GAUCGAACCGGGUUCGGCCGaACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11413 | 0.7 | 0.460794 |
Target: 5'- -gAGUUUGccgaGUCCAGaCCGGCUUGGGCc -3' miRNA: 3'- gaUCGAAC----CGGGUUcGGCCGAACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11471 | 0.99 | 0.004602 |
Target: 5'- gCUAGCUUGGCCCAAGCCGGUcUGGACu -3' miRNA: 3'- -GAUCGAACCGGGUUCGGCCGaACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11478 | 0.7 | 0.460794 |
Target: 5'- -gAGUUUGccgaGUCCAGaCCGGCUUGGGCc -3' miRNA: 3'- gaUCGAAC----CGGGUUcGGCCGAACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11536 | 0.99 | 0.004602 |
Target: 5'- gCUAGCUUGGCCCAAGCCGGUcUGGACu -3' miRNA: 3'- -GAUCGAACCGGGUUCGGCCGaACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11543 | 0.7 | 0.460794 |
Target: 5'- -gAGUUUGccgaGUCCAGaCCGGCUUGGGCc -3' miRNA: 3'- gaUCGAAC----CGGGUUcGGCCGAACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11601 | 0.99 | 0.004602 |
Target: 5'- gCUAGCUUGGCCCAAGCCGGUcUGGACu -3' miRNA: 3'- -GAUCGAACCGGGUUCGGCCGaACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11608 | 0.7 | 0.460794 |
Target: 5'- -gAGUUUGccgaGUCCAGaCCGGCUUGGGCc -3' miRNA: 3'- gaUCGAAC----CGGGUUcGGCCGAACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11665 | 0.99 | 0.004602 |
Target: 5'- gCUAGCUUGGCCCAAGCCGGUcUGGACu -3' miRNA: 3'- -GAUCGAACCGGGUUCGGCCGaACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11673 | 0.7 | 0.460794 |
Target: 5'- -gAGUUUGccgaGUCCAGaCCGGCUUGGGCc -3' miRNA: 3'- gaUCGAAC----CGGGUUcGGCCGAACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11730 | 0.99 | 0.004602 |
Target: 5'- gCUAGCUUGGCCCAAGCCGGUcUGGACu -3' miRNA: 3'- -GAUCGAACCGGGUUCGGCCGaACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11738 | 0.7 | 0.460794 |
Target: 5'- -gAGUUUGccgaGUCCAGaCCGGCUUGGGCc -3' miRNA: 3'- gaUCGAAC----CGGGUUcGGCCGAACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11795 | 0.99 | 0.004602 |
Target: 5'- gCUAGCUUGGCCCAAGCCGGUcUGGACu -3' miRNA: 3'- -GAUCGAACCGGGUUCGGCCGaACCUG- -5' |
|||||||
28324 | 3' | -57.2 | NC_005905.1 | + | 11803 | 0.7 | 0.460794 |
Target: 5'- -gAGUUUGccgaGUCCAGaCCGGCUUGGGCc -3' miRNA: 3'- gaUCGAAC----CGGGUUcGGCCGAACCUG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home