miRNA display CGI

Results 21 - 25 of 25 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
5550	5'	-54.5	NC_001806.1	+	34392	0.69	0.807189
	Target:  5'- gGUGGg-UGGGCgGCGGugGCCGg--- -3' miRNA:   3'- -CACCagACCUGgCGCCugUGGUaaau -5'
5550	5'	-54.5	NC_001806.1	+	25426	0.7	0.788864
	Target:  5'- gGUGGU--GGugCGCGGGCGCCc---- -3' miRNA:   3'- -CACCAgaCCugGCGCCUGUGGuaaau -5'
5550	5'	-54.5	NC_001806.1	+	52205	0.72	0.669291
	Target:  5'- -cGGUacguacgGGACCGUGGAUACCGUc-- -3' miRNA:   3'- caCCAga-----CCUGGCGCCUGUGGUAaau -5'
5550	5'	-54.5	NC_001806.1	+	30858	0.72	0.648478
	Target:  5'- ---uUCUGGGCCGCGGGgGCCGa--- -3' miRNA:   3'- caccAGACCUGGCGCCUgUGGUaaau -5'
5550	5'	-54.5	NC_001806.1	+	140068	1.07	0.005035
	Target:  5'- cGUGGUCUGGACCGCGGACACCAUUUAc -3' miRNA:   3'- -CACCAGACCUGGCGCCUGUGGUAAAU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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