Results 1 - 20 of 58 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 101197 | 1.07 | 0.016236 |
Target: 5'- aAAAAUAGCACGCGCUUUUCGAGAGCGu -3' miRNA: 3'- -UUUUAUCGUGCGCGAAAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 101329 | 1.07 | 0.016236 |
Target: 5'- aAAAAUAGCACGCGCUUUUCGAGAGCGu -3' miRNA: 3'- -UUUUAUCGUGCGCGAAAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 101395 | 1.07 | 0.016236 |
Target: 5'- aAAAAUAGCACGCGCUUUUCGAGAGCGu -3' miRNA: 3'- -UUUUAUCGUGCGCGAAAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 101461 | 1.07 | 0.016236 |
Target: 5'- aAAAAUAGCACGCGCUUUUCGAGAGCGu -3' miRNA: 3'- -UUUUAUCGUGCGCGAAAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 130371 | 0.98 | 0.054672 |
Target: 5'- aAAAGUAGCACGCGCcUUUCGAGAGCGu -3' miRNA: 3'- -UUUUAUCGUGCGCGaAAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 101593 | 0.98 | 0.054672 |
Target: 5'- aAAAAUAGCACGCGCcUUUCGAGAGCGu -3' miRNA: 3'- -UUUUAUCGUGCGCGaAAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 101527 | 0.98 | 0.054672 |
Target: 5'- aAAAAUAGCACGCGCcUUUCGAGAGCGu -3' miRNA: 3'- -UUUUAUCGUGCGCGaAAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 101263 | 0.98 | 0.054672 |
Target: 5'- aAAAAUAGCACGCGCcUUUCGAGAGCGu -3' miRNA: 3'- -UUUUAUCGUGCGCGaAAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 101131 | 0.98 | 0.054672 |
Target: 5'- aAAAAUAGCACGCGCcUUUCGAGAGCGu -3' miRNA: 3'- -UUUUAUCGUGCGCGaAAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 130533 | 0.98 | 0.054672 |
Target: 5'- aAAAAUAGCACGCGCcUUUCGAGAGCGu -3' miRNA: 3'- -UUUUAUCGUGCGCGaAAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 17064 | 0.97 | 0.065133 |
Target: 5'- aAAAAUAGCACGCGC-UUUCGAGAGCGu -3' miRNA: 3'- -UUUUAUCGUGCGCGaAAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 130173 | 0.97 | 0.067055 |
Target: 5'- aAAAAUAGCACGCGCcgUUCGAGAGCGu -3' miRNA: 3'- -UUUUAUCGUGCGCGaaAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 130047 | 0.97 | 0.067055 |
Target: 5'- aAAAAUAGCACGCGCcgUUCGAGAGCGu -3' miRNA: 3'- -UUUUAUCGUGCGCGaaAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 130239 | 0.97 | 0.067055 |
Target: 5'- aAAAAUAGCACGCGCcgUUCGAGAGCGu -3' miRNA: 3'- -UUUUAUCGUGCGCGaaAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 130305 | 0.97 | 0.071063 |
Target: 5'- aAAAAUAGCACGCGCcgUUCGAGAGCGc -3' miRNA: 3'- -UUUUAUCGUGCGCGaaAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 130471 | 0.9 | 0.17561 |
Target: 5'- ---cUAGCACGCGCcgUUCGAGAGCGu -3' miRNA: 3'- uuuuAUCGUGCGCGaaAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 17129 | 0.84 | 0.361427 |
Target: 5'- aAAAAUAGCACaCGCcgUUCGAGAGCGu -3' miRNA: 3'- -UUUUAUCGUGcGCGaaAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 28926 | 0.78 | 0.69118 |
Target: 5'- --cGUGGC-CGCGUaUUUCGAGAGUGg -3' miRNA: 3'- uuuUAUCGuGCGCGaAAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 130111 | 0.77 | 0.712891 |
Target: 5'- ---cUAGCACaCGCcgUUCGAGAGCGu -3' miRNA: 3'- uuuuAUCGUGcGCGaaAAGCUCUCGC- -5' |
|||||||
6996 | 5' | -48.2 | NC_001875.2 | + | 79311 | 0.76 | 0.744825 |
Target: 5'- ---cUGGCGCGUGCUUU-CGAuGAGCGc -3' miRNA: 3'- uuuuAUCGUGCGCGAAAaGCU-CUCGC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home