miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
8113	3'	-54.7	NC_001978.2	+	13194	0.69	0.508325
	Target:  5'- cGUGucGGGGUCGGCAGCgUCGagcggcauucCUACCg -3' miRNA:   3'- uCAUucCCUCAGCCGUUG-GGC----------GAUGG- -5'
8113	3'	-54.7	NC_001978.2	+	365	0.68	0.562781
	Target:  5'- cGUGucgGGGGAGUaGGCGcccauACCgGCUuGCCa -3' miRNA:   3'- uCAU---UCCCUCAgCCGU-----UGGgCGA-UGG- -5'
8113	3'	-54.7	NC_001978.2	+	40350	0.68	0.573879
	Target:  5'- --cGGGGGAc-CGGCcgacccuuCCCGCUGCCc -3' miRNA:   3'- ucaUUCCCUcaGCCGuu------GGGCGAUGG- -5'
8113	3'	-54.7	NC_001978.2	+	18306	0.66	0.65244
	Target:  5'- gAGUGAGauuugagccGGAGcCGGCAuGCCCGa-ACCc -3' miRNA:   3'- -UCAUUC---------CCUCaGCCGU-UGGGCgaUGG- -5'
8113	3'	-54.7	NC_001978.2	+	30506	0.66	0.674868
	Target:  5'- cGGcAAGGGAaccGUCGGCGuCCgCGUUcucaGCCg -3' miRNA:   3'- -UCaUUCCCU---CAGCCGUuGG-GCGA----UGG- -5'
8113	3'	-54.7	NC_001978.2	+	23069	0.66	0.674868
	Target:  5'- -cUGAaGGAcGUCGGCAACCCGg-GCg -3' miRNA:   3'- ucAUUcCCU-CAGCCGUUGGGCgaUGg -5'
8113	3'	-54.7	NC_001978.2	+	22705	1.13	0.000431
	Target:  5'- gAGUAAGGGAGUCGGCAACCCGCUACCg -3' miRNA:   3'- -UCAUUCCCUCAGCCGUUGGGCGAUGG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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