miRNA display CGI

Results 21 - 25 of 25 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
8223	3'	-59	NC_001978.2	+	29486	0.73	0.166385
	Target:  5'- gGCGCcauacagcGACCCccagGACCGGCCCccUAGGUCa -3' miRNA:   3'- -UGCGa-------CUGGG----CUGGCCGGG--AUUCAGc -5'
8223	3'	-59	NC_001978.2	+	858	0.73	0.157604
	Target:  5'- cGCGCUGACCCuuCCGGUUgUAAGcCGc -3' miRNA:   3'- -UGCGACUGGGcuGGCCGGgAUUCaGC- -5'
8223	3'	-59	NC_001978.2	+	22125	0.74	0.14129
	Target:  5'- cGCGCUGAUCUGAC--GCCCUAcGUCGa -3' miRNA:   3'- -UGCGACUGGGCUGgcCGGGAUuCAGC- -5'
8223	3'	-59	NC_001978.2	+	29401	0.83	0.031146
	Target:  5'- gACGCUGACCUagggGGCCGGUCCUGggGGUCGc -3' miRNA:   3'- -UGCGACUGGG----CUGGCCGGGAU--UCAGC- -5'
8223	3'	-59	NC_001978.2	+	40000	1.08	0.000405
	Target:  5'- gACGCUGACCCGACCGGCCCUAAGUCGu -3' miRNA:   3'- -UGCGACUGGGCUGGCCGGGAUUCAGC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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