Results 21 - 40 of 68 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 104957 | 0.73 | 0.995271 |
Target: 5'- cAUAGU-CA--AUCUUUGCUUUCGUCc -3' miRNA: 3'- uUAUCAuGUgcUAGAAACGAAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 104956 | 0.98 | 0.156695 |
Target: 5'- --cAGUACAUGAUCUUUGCUUUCGUCc -3' miRNA: 3'- uuaUCAUGUGCUAGAAACGAAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 104835 | 0.89 | 0.415941 |
Target: 5'- -uUAGUACAUGAUCUUUGCUUUCaUCg -3' miRNA: 3'- uuAUCAUGUGCUAGAAACGAAAGcAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 104769 | 0.9 | 0.406257 |
Target: 5'- ----aUACAUGAUCUUUGCUUUCGUCa -3' miRNA: 3'- uuaucAUGUGCUAGAAACGAAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 71829 | 1 | 0.117439 |
Target: 5'- -cUAGUACAUGAUCUUUGCUUUCGUCc -3' miRNA: 3'- uuAUCAUGUGCUAGAAACGAAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 71637 | 0.91 | 0.351233 |
Target: 5'- --cAGUACACGAUCUUUGCUUUCaUCg -3' miRNA: 3'- uuaUCAUGUGCUAGAAACGAAAGcAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 59833 | 0.66 | 0.999998 |
Target: 5'- ---uGU-CGCGAUCgaugUUGCcguUUUCGUCg -3' miRNA: 3'- uuauCAuGUGCUAGa---AACG---AAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 53315 | 0.98 | 0.156695 |
Target: 5'- --cAGUACAUGAUCUUUGCUUUCGUCc -3' miRNA: 3'- uuaUCAUGUGCUAGAAACGAAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 53233 | 0.88 | 0.498134 |
Target: 5'- ----aUACAUGAUCUUUGCUUUCGUCc -3' miRNA: 3'- uuaucAUGUGCUAGAAACGAAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 53123 | 1 | 0.12091 |
Target: 5'- --cAGUACAUGAUCUUUGCUUUCGUCg -3' miRNA: 3'- uuaUCAUGUGCUAGAAACGAAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 53042 | 0.89 | 0.425764 |
Target: 5'- -cUAGUACAUGAUCUUUGCUUUCaUCg -3' miRNA: 3'- uuAUCAUGUGCUAGAAACGAAAGcAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 52976 | 0.8 | 0.853574 |
Target: 5'- -uUAGUACACcAUCUUUGCUUUCaUCg -3' miRNA: 3'- uuAUCAUGUGcUAGAAACGAAAGcAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 52900 | 0.75 | 0.980251 |
Target: 5'- -uUAGUACAUcAUCUUUGCUUUCaUCc -3' miRNA: 3'- uuAUCAUGUGcUAGAAACGAAAGcAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 52857 | 1 | 0.117439 |
Target: 5'- -cUAGUACAUGAUCUUUGCUUUCGUCc -3' miRNA: 3'- uuAUCAUGUGCUAGAAACGAAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 52784 | 1.02 | 0.092847 |
Target: 5'- --cGGUACACGAUCUUUGCUUUCGUCc -3' miRNA: 3'- uuaUCAUGUGCUAGAAACGAAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 52664 | 0.84 | 0.66663 |
Target: 5'- -uUAGUACACGAUgUUUGCUUUCaUCg -3' miRNA: 3'- uuAUCAUGUGCUAgAAACGAAAGcAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 42453 | 0.78 | 0.91483 |
Target: 5'- --aAGUcaaACACaAUCUUUGCUUUCGUCc -3' miRNA: 3'- uuaUCA---UGUGcUAGAAACGAAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 42378 | 0.76 | 0.968763 |
Target: 5'- -----aACACaAUCUUUGCUUUCGUCc -3' miRNA: 3'- uuaucaUGUGcUAGAAACGAAAGCAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 42257 | 0.89 | 0.415941 |
Target: 5'- -uUAGUACAUGAUCUUUGCUUUCaUCg -3' miRNA: 3'- uuAUCAUGUGCUAGAAACGAAAGcAG- -5' |
|||||||
8488 | 3' | -43.8 | NC_002169.1 | + | 42193 | 1.06 | 0.055853 |
Target: 5'- uAUAGUACACGAUCUUUGCUUUCGUCc -3' miRNA: 3'- uUAUCAUGUGCUAGAAACGAAAGCAG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home