Results 21 - 40 of 291 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 40354 | 0.66 | 0.924194 |
Target: 5'- --uGCCGCGGACGccgacCGCggcGAGcCCGGg -3' miRNA: 3'- agcCGGCGCCUGCu----GCGa--UUCaGGCU- -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 83970 | 0.66 | 0.913448 |
Target: 5'- cCGGCgGCGGAugccCGGCGCggggcGGUCgCGc -3' miRNA: 3'- aGCCGgCGCCU----GCUGCGau---UCAG-GCu -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 15476 | 0.66 | 0.918928 |
Target: 5'- cUCGGgCGCGG-CG-CGCUccGGcCCGAa -3' miRNA: 3'- -AGCCgGCGCCuGCuGCGAu-UCaGGCU- -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 6673 | 0.66 | 0.924194 |
Target: 5'- cCGGCCG-GGACG-CGCUccGGGacgCCGu -3' miRNA: 3'- aGCCGGCgCCUGCuGCGA--UUCa--GGCu -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 126405 | 0.66 | 0.913448 |
Target: 5'- gCGGuCCGCGGcCGcCGCcGAGacCCGAg -3' miRNA: 3'- aGCC-GGCGCCuGCuGCGaUUCa-GGCU- -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 121467 | 0.66 | 0.913448 |
Target: 5'- cCGGCCcCGGGCGGCGCaga---CGAg -3' miRNA: 3'- aGCCGGcGCCUGCUGCGauucagGCU- -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 148085 | 0.66 | 0.924194 |
Target: 5'- gCGGCgCGuCGGcccuCGugGCUaGAGUCgCGAu -3' miRNA: 3'- aGCCG-GC-GCCu---GCugCGA-UUCAG-GCU- -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 222392 | 0.66 | 0.913448 |
Target: 5'- aCGGUgGCGGugGcCG---GGUCCGGa -3' miRNA: 3'- aGCCGgCGCCugCuGCgauUCAGGCU- -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 119473 | 0.66 | 0.907755 |
Target: 5'- gCGGaaGUGGAaGGCGC--GGUCCGGc -3' miRNA: 3'- aGCCggCGCCUgCUGCGauUCAGGCU- -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 13691 | 0.66 | 0.913448 |
Target: 5'- aCGGCCGCGGcggugaucACGgGCGCgauc-CCGAg -3' miRNA: 3'- aGCCGGCGCC--------UGC-UGCGauucaGGCU- -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 226638 | 0.66 | 0.924194 |
Target: 5'- cCGaGcCCGCGGAccgucgucaccCGACGCgccGGGUCCa- -3' miRNA: 3'- aGC-C-GGCGCCU-----------GCUGCGa--UUCAGGcu -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 47602 | 0.66 | 0.901851 |
Target: 5'- aCGGCCagggaGCGGACGgACGUgcAGUUCc- -3' miRNA: 3'- aGCCGG-----CGCCUGC-UGCGauUCAGGcu -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 133419 | 0.66 | 0.924194 |
Target: 5'- aCGGCCGCGcGGuCcGCGCguuuGGUuCCGGg -3' miRNA: 3'- aGCCGGCGC-CU-GcUGCGau--UCA-GGCU- -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 151567 | 0.66 | 0.924194 |
Target: 5'- gCGGUC-CGGACGGuCGCUcgcAGUCgCGGa -3' miRNA: 3'- aGCCGGcGCCUGCU-GCGAu--UCAG-GCU- -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 57041 | 0.66 | 0.918928 |
Target: 5'- -aGGCCGCGucCGACGaccgGGGggcgCCGGg -3' miRNA: 3'- agCCGGCGCcuGCUGCga--UUCa---GGCU- -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 94763 | 0.66 | 0.918928 |
Target: 5'- cCGGCCcuCGGAgCGuCGCgccGUCCGGa -3' miRNA: 3'- aGCCGGc-GCCU-GCuGCGauuCAGGCU- -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 58043 | 0.66 | 0.923677 |
Target: 5'- cCGGCCGCGGcCGGaccguccCGC--GGUaCCGGa -3' miRNA: 3'- aGCCGGCGCCuGCU-------GCGauUCA-GGCU- -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 96732 | 0.66 | 0.92624 |
Target: 5'- cCGGcCCGCGGgaaccggacgagcgaGCGGgGCcccGUCCGAg -3' miRNA: 3'- aGCC-GGCGCC---------------UGCUgCGauuCAGGCU- -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 52792 | 0.66 | 0.924194 |
Target: 5'- cUGGUCGCGGA-GACGCagcgGGGgCUGAc -3' miRNA: 3'- aGCCGGCGCCUgCUGCGa---UUCaGGCU- -5' |
|||||||
9036 | 5' | -58.2 | NC_002512.2 | + | 104876 | 0.66 | 0.901851 |
Target: 5'- -gGGCgGCGccGACGGCGCgacgGGG-CCGGg -3' miRNA: 3'- agCCGgCGC--CUGCUGCGa---UUCaGGCU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home