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| GenBank Identifier | RefSeq Acc. | Name |
| 51518014 | NC_006146.1 | Cercopithecine herpesvirus 15 |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 29077 | - | 106499 | 89 | 19 | -19.8 | YP_067986 | 5' arm 3' arm | ||
| 29076 | - | 106185 | 84 | 19.5 | -21.5 | YP_067986 | 5' arm 3' arm | ||
| 29075 | - | 106042 | 89 | 20 | -26.7 | YP_067986 | 5' arm 3' arm | ||
| 29074 | - | 105911 | 90 | 19 | -23.3 | YP_067986 | 5' arm 3' arm | ||
| 29073 | - | 104530 | 88 | 20.5 | -19.6 | YP_067985 | 5' arm 3' arm | ||
| 29072 | - | 104388 | 90 | 19.5 | -24.9 | YP_067985 | 5' arm 3' arm | ||
| 29071 | - | 101768 | 90 | 21 | -25.2 | YP_067982 | 5' arm 3' arm | ||
| 29070 | - | 101279 | 89 | 19 | -22 | YP_067982 | 5' arm 3' arm | ||
| 29069 | - | 100320 | 90 | 22 | -26.8 | YP_067981 | 5' arm 3' arm | ||
| 29068 | - | 100054 | 88 | 20 | -25.2 | YP_067981 | 5' arm 3' arm | ||
| 29067 | - | 99852 | 90 | 21 | -19.4 | YP_067981 | 5' arm 3' arm | ||
| 29066 | - | 99651 | 89 | 19 | -24.7 | YP_067981 | 5' arm 3' arm | ||
| 29065 | - | 98990 | 90 | 21 | -36 | 5' arm 3' arm | |||
| 29064 | - | 97490 | 90 | 20 | -31 | YP_067979 | 5' arm 3' arm | ||
| 29063 | - | 97375 | 90 | 20.5 | -19.5 | YP_067978 | 5' arm 3' arm | ||
| 29062 | - | 97062 | 89 | 20 | -22.6 | YP_067978 | 5' arm 3' arm | ||
| 29061 | - | 96831 | 89 | 20 | -19.4 | YP_067978 | 5' arm 3' arm | ||
| 29060 | - | 96533 | 86 | 25 | -27 | YP_067978 | 5' arm 3' arm | ||
| 29059 | - | 96065 | 89 | 20 | -19.5 | YP_067978 | 5' arm 3' arm | ||
| 29058 | - | 95765 | 89 | 21 | -28.9 | YP_067977 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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