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| GenBank Identifier | RefSeq Acc. | Name |
| 38638196 | NC_005264.1 | Psittacid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24695 | - | 122455 | 90 | 19.5 | -22 | NP_944441 | 5' arm 3' arm | ||
| 24702 | - | 126536 | 88 | 20.5 | -27.6 | NP_944441 | 5' arm 3' arm | ||
| 24700 | - | 125587 | 90 | 21 | -23.4 | NP_944441 | 5' arm 3' arm | ||
| 24703 | - | 127279 | 89 | 22.5 | -23.7 | NP_944441 | 5' arm 3' arm | ||
| 24533 | + | 155636 | 88 | 20.5 | -27.6 | NP_944441 | 5' arm 3' arm | ||
| 24539 | + | 158850 | 85 | 20.5 | -28.3 | NP_944441 | 5' arm 3' arm | ||
| 24757 | - | 159960 | 90 | 20 | -28.7 | NP_944441 | 5' arm 3' arm | ||
| 24500 | + | 127543 | 90 | 24 | -20.1 | NP_944441 | 5' arm 3' arm | ||
| 24759 | - | 160412 | 88 | 19 | -27.8 | NP_944441 | 5' arm 3' arm | ||
| 24753 | - | 154779 | 84 | 20.5 | -19.8 | NP_944441 | 5' arm 3' arm | ||
| 24761 | - | 160625 | 87 | 19.5 | -29.1 | NP_944441 | 5' arm 3' arm | ||
| 24535 | + | 156585 | 90 | 21 | -23.4 | NP_944441 | 5' arm 3' arm | ||
| 24534 | + | 156360 | 90 | 22.5 | -21.3 | NP_944441 | 5' arm 3' arm | ||
| 24760 | - | 160509 | 87 | 22 | -21.8 | NP_944441 | 5' arm 3' arm | ||
| 24540 | + | 159395 | 90 | 20 | -21.4 | NP_944441 | 5' arm 3' arm | ||
| 24696 | - | 122777 | 90 | 20 | -21.4 | NP_944441 | 5' arm 3' arm | ||
| 24697 | - | 123322 | 85 | 20.5 | -28.3 | NP_944441 | 5' arm 3' arm | ||
| 24498 | + | 125647 | 90 | 19 | -23.3 | NP_944441 | 5' arm 3' arm | ||
| 24488 | + | 118170 | 88 | 21.5 | -27.4 | NP_944440 | 5' arm 3' arm | ||
| 24689 | - | 118398 | 89 | 20 | -20.6 | NP_944440 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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