miRNA display CGI


Results 61 - 80 of 119 are showing below:
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GenBank Identifier RefSeq Acc. Name
58042841 NC_005137.2 Choristoneura fumiferana defective nucleopolyhedrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22960 - 108114 90 20.5 -23.3 NP_932737 5' arm      3' arm
22876 + 49722 85 22.5 -23.3 NP_932670 5' arm      3' arm
22916 - 4365 88 19 -23.2 NP_932617 5' arm      3' arm
22911 + 122611 90 21.5 -23.2 NP_932750 5' arm      3' arm
22927 - 31764 88 20.5 -23.11 NP_932650 5' arm      3' arm
22951 - 82231 89 28 -23.1 NP_932705 5' arm      3' arm
22930 - 33345 90 20.5 -23.1 NP_932651 5' arm      3' arm
22961 - 108251 90 21 -22.8 NP_932737 5' arm      3' arm
22947 - 73591 84 21 -22.7 NP_932697 5' arm      3' arm
22925 - 27536 87 19.5 -22.7 NP_932644 5' arm      3' arm
22919 - 12790 89 20.5 -22.6 NP_932625 5' arm      3' arm
22954 - 89323 87 19 -22.5 NP_932712 5' arm      3' arm
22931 - 34722 90 19 -22.3 NP_932654 5' arm      3' arm
22920 - 16634 90 22 -22.2 NP_932630 5' arm      3' arm
22894 + 89967 79 21 -22.2 NP_932715 5' arm      3' arm
22932 - 35489 89 27.5 -22.12 NP_932654 5' arm      3' arm
22888 + 75993 86 21 -22.1 NP_932697 5' arm      3' arm
22883 + 63977 88 20.5 -22.1 NP_932687 5' arm      3' arm
22929 - 33075 88 22.5 -22.1 NP_932651 5' arm      3' arm
22944 - 63784 90 21.5 -22 NP_932687 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.