miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
10975	-	58729	90	24.5	-23.5	NP_116385		5' arm      3' arm
10792	+	115114	89	24.5	-20.2	NP_116420		5' arm      3' arm
10955	-	47654	88	24.5	-22.2	NP_116375		5' arm      3' arm
10907	+	188356	88	24.5	-21.7			5' arm      3' arm
10902	+	185606	87	24.5	-22.5			5' arm      3' arm
11008	-	76313	90	24.5	-22.8	NP_116400		5' arm      3' arm
10977	-	59205	90	24.5	-31.7	NP_116385		5' arm      3' arm
10716	+	17253	89	24.5	-35.7			5' arm      3' arm
10973	-	57145	89	24.5	-24.4			5' arm      3' arm
10817	+	130821	89	24.5	-20.7	NP_116432		5' arm      3' arm
10779	+	106707	89	24.5	-22.4			5' arm      3' arm
11074	-	107083	88	24	-30.3			5' arm      3' arm
10887	+	174782	89	24	-33.9	NP_116465		5' arm      3' arm
10746	+	70313	90	24	-24.1	NP_116397		5' arm      3' arm
11000	-	72791	90	24	-24.7	NP_116398		5' arm      3' arm
10712	+	14270	89	24	-24.9	NP_116340		5' arm      3' arm
10888	+	175542	89	24	-23.1	NP_116465		5' arm      3' arm
10820	+	131659	90	24	-26.3	NP_116432		5' arm      3' arm
10998	-	71751	90	23.5	-28	NP_116398		5' arm      3' arm
10914	+	193466	86	23.5	-21.9	NP_116483		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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