miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8895	-	13360	87	21	-22.6	NP_061516		5' arm      3' arm
8817	+	16325	84	21	-22.2	NP_061522		5' arm      3' arm
8819	+	16710	90	21	-20.4	NP_061522		5' arm      3' arm
8811	+	12026	88	21	-22.8	NP_061515		5' arm      3' arm
8840	+	30677	89	21	-31.01			5' arm      3' arm
8834	+	27808	85	21	-27.6	NP_061531		5' arm      3' arm
8794	+	2557	86	21	-21.5	NP_061500		5' arm      3' arm
8788	+	427	78	20.5	-22.1	NP_061498		5' arm      3' arm
8804	+	8267	84	20.5	-22.5	NP_061508		5' arm      3' arm
8866	+	47136	90	20.5	-25.3	NP_061569		5' arm      3' arm
8902	-	17690	87	20.5	-22.8	NP_061522		5' arm      3' arm
8805	+	9180	90	20.5	-19.4	NP_061510		5' arm      3' arm
8905	-	18932	87	20.5	-20	NP_061523		5' arm      3' arm
8924	-	45266	88	20.5	-23.7			5' arm      3' arm
8871	+	53327	88	20.5	-24.1			5' arm      3' arm
8826	+	19351	89	20.5	-20.4	NP_061523		5' arm      3' arm
8926	-	47422	90	20.5	-33.1	NP_061569		5' arm      3' arm
8814	+	14899	89	20.5	-27.4	NP_061519		5' arm      3' arm
8837	+	28813	89	20.5	-22.9	NP_061534		5' arm      3' arm
8892	-	11167	89	20.5	-26.3	NP_061514		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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